diff --git a/source/dub/recipe/packagerecipe.d b/source/dub/recipe/packagerecipe.d
index 5ecf3de..a879991 100644
--- a/source/dub/recipe/packagerecipe.d
+++ b/source/dub/recipe/packagerecipe.d
@@ -250,9 +250,16 @@
 						continue;
 					}
 
-					foreach (d; dirEntries(path.toNativeString(), pattern, SpanMode.depth)) {
-						import std.path : baseName;
-						if (baseName(d.name)[0] == '.' || d.isDir) continue;
+					auto pstr = path.toNativeString();
+					foreach (d; dirEntries(pstr, pattern, SpanMode.depth)) {
+						import std.path : baseName, pathSplitter;
+						import std.algorithm.searching : canFind;
+						// eliminate any hidden files, or files in hidden directories. But always include
+						// files that are listed inside hidden directories that are specifically added to
+						// the project.
+						if (d.isDir || pathSplitter(d.name[pstr.length .. $])
+								   .canFind!(name => name.length && name[0] == '.'))
+							continue;
 						auto src = NativePath(d.name).relativeTo(base_path);
 						files ~= src.toNativeString();
 					}
diff --git a/test/issue1372-ignore-files-in-hidden-dirs.sh b/test/issue1372-ignore-files-in-hidden-dirs.sh
new file mode 100755
index 0000000..1ecede2
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs.sh
@@ -0,0 +1,37 @@
+#!/usr/bin/env bash
+
+set -e
+
+. $(dirname "${BASH_SOURCE[0]}")/common.sh
+
+
+BASEDIR=${CURR_DIR}/issue1372-ignore-files-in-hidden-dirs
+rm -rf ${BASEDIR}/.dub
+rm -rf ${BASEDIR}/issue1372
+
+echo "Compile and ignore hidden directories"
+${DUB} build --root ${BASEDIR} --config=normal --force
+OUTPUT=`${BASEDIR}/issue1372`
+if [[ "$OUTPUT" != "no hidden file compiled" ]]; then die "Normal compilation failed"; fi
+
+rm -rf ${BASEDIR}/.dub
+rm -rf ${BASEDIR}/issue1372
+
+
+echo "Compile and explcitly include file in hidden directories"
+${DUB} build --root ${BASEDIR} --config=hiddenfile --force
+OUTPUT=`${BASEDIR}/issue1372`
+
+if [[ "$OUTPUT" != "hidden file compiled" ]]; then die "Hidden file compilation failed"; fi
+
+rm -rf ${BASEDIR}/.dub
+rm -rf ${BASEDIR}/issue1372
+
+echo "Compile and explcitly include extra hidden directories"
+${DUB} build --root ${BASEDIR} --config=hiddendir --force
+OUTPUT=`${BASEDIR}/issue1372`
+
+if [[ "$OUTPUT" != "hidden dir compiled" ]]; then die "Hidden directory compilation failed"; fi
+
+rm -rf ${BASEDIR}/.dub
+rm -rf ${BASEDIR}/issue1372
diff --git a/test/issue1372-ignore-files-in-hidden-dirs/.hiddensource/hello.d b/test/issue1372-ignore-files-in-hidden-dirs/.hiddensource/hello.d
new file mode 100644
index 0000000..47aa81e
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs/.hiddensource/hello.d
@@ -0,0 +1,7 @@
+module hello;
+import std.stdio;
+
+void helloFun()
+{
+    writeln("hidden dir compiled");
+}
diff --git a/test/issue1372-ignore-files-in-hidden-dirs/dub.json b/test/issue1372-ignore-files-in-hidden-dirs/dub.json
new file mode 100644
index 0000000..a07edbd
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs/dub.json
@@ -0,0 +1,22 @@
+{
+    "name": "issue1372",
+    "mainSourceFile": "source/app.d",
+    "configurations": [
+        {
+            "name": "normal",
+            "targetType": "executable"
+        },
+        {
+            "name": "hiddenfile",
+            "targetType": "executable",
+            "versions" : ["UseHiddenFile"],
+            "sourceFiles":["source/.compileMe/hello.d"]
+        },
+        {
+            "name": "hiddendir",
+            "targetType": "executable",
+            "versions" : ["UseHiddenFile"],
+            "sourcePaths":["source", ".hiddensource"],
+            "importPaths":["source", ".hiddensource"]
+        }]
+}
diff --git a/test/issue1372-ignore-files-in-hidden-dirs/source/.AppleDouble/app.d b/test/issue1372-ignore-files-in-hidden-dirs/source/.AppleDouble/app.d
new file mode 100644
index 0000000..ff89f4f
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs/source/.AppleDouble/app.d
@@ -0,0 +1,2 @@
+This file needs to contain something to show the issue up.
+If it's empty, it'll get ignored.
diff --git a/test/issue1372-ignore-files-in-hidden-dirs/source/.compileMe/hello.d b/test/issue1372-ignore-files-in-hidden-dirs/source/.compileMe/hello.d
new file mode 100644
index 0000000..6cf6595
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs/source/.compileMe/hello.d
@@ -0,0 +1,7 @@
+module hello;
+import std.stdio;
+
+void helloFun()
+{
+    writeln("hidden file compiled");
+}
diff --git a/test/issue1372-ignore-files-in-hidden-dirs/source/app.d b/test/issue1372-ignore-files-in-hidden-dirs/source/app.d
new file mode 100644
index 0000000..126276e
--- /dev/null
+++ b/test/issue1372-ignore-files-in-hidden-dirs/source/app.d
@@ -0,0 +1,18 @@
+import std.stdio;
+
+void main()
+{
+    version(UseHiddenFile)
+    {
+        import hello;
+        helloFun();
+    }
+    else
+    {
+        static assert(!__traits(compiles, {
+            import hello;
+            helloFun();
+        }));
+        writeln("no hidden file compiled");
+    }
+}