Now that we can override the git clone operation and load
from the virtual filesystem, we can remove a lot of the
duplicated logic. This is currently hardcoded to a dub.json,
but future iterations can store an FSEntry representing the
full package.

This gets the unittest framework closer to the actual behavior,
and allows us to mock basic FS operations such as mkdir and writeFile.
Further improvements can be made to support more operations,
and to have package setup done before `TestDub` instantiation.

This was a null pointer being passed down.
However, while looking at the code, it was obvious that similar
bugs would trigger for subpackages (as the code was not handling
`null` packages either), so test cases for those have been added.